What is The Difference Between Payroll Liabilities And Payroll Expenses In QuickBooks?

Understanding the distinction between payroll liabilities and expenses is fundamental to maintaining accurate financial statements, adhering to generally accepted accounting principles (GAAP), and ensuring proper tax remittance. Payroll expenses represent the actual costs a business incurs for employing staff, including gross wages, salaries, and the employer’s share of taxes and benefits. These expenses directly impact the company’s profitability and are reported on the Income Statement. In contrast, payroll liabilities are short-term financial obligations: amounts withheld from employee paychecks (like income tax and FICA) or accrued employer obligations (like FUTA) that are owed to third parties, such as government agencies or insurance carriers. These unpaid obligations are recorded on the Balance Sheet until the funds are dispersed. The use of the accrual method of accounting is essential to correctly record these transactions, matching the expense to the period the work was performed, not just when the cash payment was made. Correct classification is also critical when dealing with independent contractors (1099 workers), whose payments result in an expense but create no corresponding payroll liabilities for the payer.

Highlights (Key Facts & Solutions)

• Difference: Payroll liabilities are amounts owed but not yet paid (Balance Sheet item, e.g., employee tax withholdings). Payroll expenses are the costs incurred by the business for employee services (Income Statement item, e.g., gross wages and employer taxes).
• Accounting Method: The accrual method is essential for accurate payroll accounting, ensuring expenses are recorded when incurred, not when paid, to comply with the matching principle of GAAP.
• Tax Impact FICA: FICA taxes (Social Security and Medicare) are a shared liability; the employer and employee each pay an equal share. The employer’s share is a Payroll Expense.
• Tax Impact FUTA/SUTA: FUTA (Federal Unemployment) and most SUTA (State Unemployment) taxes are paid only by the employer and are solely a business expense, creating a liability until remitted.
• Independent Contractors: Payments to independent contractors create a Payroll Expense but do not create Payroll Liabilities for the payer, as the contractor handles all their own taxes.
• Accrued PTO: Accrued Paid Time Off (PTO) that vests or accumulates must be recorded as a Payroll Liability to reflect the future financial obligation owed to the employee.
• Other Liabilities: Liabilities also include non-tax deductions such as wage garnishments, union dues, and benefit premiums withheld from the employee.

Defining Payroll Liabilities

Payroll liabilities are payroll-related payments you must pay for your business which includes wages your employees have earned but you have not paid for yet, employee taxes and payroll service costs. Payroll liabilities are present in every payroll you run. However, most companies pay their payroll responsibilities quickly to avoid any legal penalties.

Some examples of payroll liabilities include:

• Withheld taxes
• Benefits deductions
• Payroll owed and yet to be paid
• Employer’s contribution to Social Security and Medicare
• Insurance premiums for the employee need to be paid to the insurance company by the employer. 

Defining Payroll Expenses

Payroll expenses are the costs associated with hiring and paying employees, such as wages, benefits, bonuses, and payroll taxes for your business. These are the expenses paid to employees in exchange for services rendered by them to a business, including regular wages, overtime, bonuses, and commissions. 

Payroll expense is the cash paid during an accounting period for salaries and wages in a cash basis company. However, in an accrual basis company, payroll expense is the amount of salaries and wages earned by employees during the period, whether or not these amounts were paid during that period.

Some examples of payroll expenses are:

• Salaries and Wages paid to employees
• Benefits paid to employees
• Paid holidays

Payroll Liabilities vs. Payroll Expenses

The terms “Payroll liability” and “Payroll expense” both deal with money, and both need to be paid by the employer. The money in a liability account shows the amount deducted from employee paychecks or the amount you still owe. Payroll liabilities have specific dollar amounts, dates, and agencies to which you must send the money. Payroll expense refers to the total payroll amount for the specified pay period. Payroll liabilities are the amount that employers pay for hiring workers. Payroll expenses are the costs incurred as a result of paying your employees for their day-to-day tasks.

Components of Payroll	Payroll Liabilities	Payroll Expenses
Timing	Payroll liabilities include unpaid wages to employees, employee tax with holdings (e.g., income taxes), and employer tax obligations that are due and will be paid later.	Payroll expenses are the expenses paid when employees earn wages and benefits during their working period.
Reporting	Payroll liabilities are recorded on the Balance Sheet until they are remitted to the government or paid to the employees.	Payroll expenses are recorded on the Income Statement as expenses like salaries, wages, payroll taxes, and employee benefits.
Nature	Payroll liabilities are obligations or debts that the company needs to pay related to payroll. In short, these costs are futuristic in nature and haven’t been paid yet.	Payroll expenses are the expenses related to gross wages, salaries, employer-paid taxes, and benefits (like health insurance or retirement contributions) that have been paid in the past.
Account Type	Payroll Liabilities are permanent accounts that are not closed at the end of the fiscal year.	Payroll Expenses are temporary accounts that will be closed at the end of every financial year.

Every business must record payroll liabilities and payroll expenses using the accrual method of accounting, which matches revenue earned with expenses incurred. The accrual method records payroll expenses in the month they are incurred, regardless of when the expenses are paid in cash.

Type of Payroll Liabilities

Some of the payroll liabilities are employee compensation, taxes, payroll service costs, and voluntary deductions, which all generate payroll liabilities. This may include taxes withheld from employees, such as federal and state income tax, social security, and Medicare.

Here’s a list of some most common payroll liabilities:

Employee Wages

When you run payroll, you are taking the necessary steps to pay your employees, and the wages you pay are a type of liability you owe. Employees receive payment for the work they did in a specific pay period, typically paid on a weekly, biweekly, semimonthly, or monthly payroll schedule. Any work employees perform but haven’t yet been compensated for is considered a liability, such as gross wages owed to employees and independent contractors.

There are several ways to calculate liability for a specific pay period:

• Salaried Workers: This liability is a portion of the annual salary owed for the pay period, plus bonuses and other incentive compensation.
• Hourly Workers: This liability is the total hours worked multiplied by the hourly rate of pay, including overtime hours. Hourly workers may also earn incentive compensation.
• Independent Contractors (Freelancers): Amounts owed based on an hourly rate agreement or calculated using a flat fee.

No taxes are withheld on compensation paid to independent contractors. However, you’re required to withhold taxes on employee pay based on information the worker provides on Form W-4.

Payroll Taxes and Insurance

Payroll tax withholdings are another integral payroll obligation. All employers must file payroll taxes and contribute these taxes for every worker they hire. Most employers must withhold money from employees’ paychecks to remit it to the appropriate tax collection agency. Taxes are withheld from pay to fund income taxes, social security, healthcare taxes, benefits contributions (e.g., pensions), etc.

Employers incur expenses for some of these taxes, including:

• Federal Income Tax Withholdings: The amounts withheld are determined by the worker’s annual income and filing status (married, single, etc.).
• FICA Taxes: These taxes are collected to fund Social Security and Medicare taxes. For the 2020 tax year, employers and workers each paid a 7.65% FICA tax rate on the workers’ gross wages, and the workers’ taxes were withheld from gross pay. 
• State Income Taxes: Each state has different requirements for withholding and paying state income tax, and some states don’t impose a state income tax.
• Federal Unemployment Tax Act (FUTA) and State Unemployment Tax Act (SUTA): Both were passed to provide temporary income for workers who lose employment—generally when the employee is not at fault. Businesses pay unemployment insurance taxes through a joint program between the federal government and the states, and only employers pay FUTA taxes.
• Workers’ Compensation Insurance: Businesses may have to purchase workers’ compensation insurance, depending on state requirements. If a worker is injured on the job, the insurance policy pays for medical costs and lost wages due to injury. Workers’ compensation premiums are paid by the employer, and the cost is categorized by the number of employees and the industry.
• Wage Garnishments: A garnishment is a court-ordered requirement to withhold employee pay and forward the amounts to a third party.

All employees must complete IRS Form W-4. When your employee fills out a W-4, it helps you to calculate their withholding allowances. The worker’s gross wages are also a factor in tax contributions. Generally, payroll taxes are paid quarterly. As payroll taxes aren’t immediately sent to the IRS or state or local agencies, they are considered liabilities until deposited.

Voluntary Deductions 

Voluntary deductions represent specific items above the statutory minimum that the employee wants to pay out of their paycheck. Health insurance premiums, retirement plan contributions, dental insurance, and other benefit programs are funded through payroll withholding.

The employer’s share of the costs is a payroll expense:

• Retirement Plans: The worker’s contributions are deducted from pay and are not an employer expense. The employer’s share of contributions, however, is a payroll expense.
• Health, Dental, Vision, and Life Insurance Premiums: Premiums paid by the employer are not withheld from pay and are included as business expenses. The worker’s share of premiums is deducted from pay and is not a payroll expense.
• Union Dues: Dues are deducted from pay and forwarded to the union on the worker’s behalf.

If a worker repays a loan from the employer, the loan payments withheld from pay are not a payroll liability or a payroll expense. Instead, the payment increases the employer’s cash account and reduces a loan-receivable (asset) account.

Payroll Service Costs 

Every business that invests in payroll software or a professional employer organization (PEO) has liabilities in payroll service costs. When working with payroll software, you may pay your service costs at the end of every month or the beginning of the following month, similar to credit card or utility bills.

PEO costs may have monthly or yearly contract fees. Payroll companies have various pricing structures. It’s essential to compare payroll software costs before you sign up because one pricing structure may be less expensive than another.

Below are the six payroll software pricing structures:

• Base Fee: This is a monthly charge or per-payroll fee.
• Per-Employee Fee: The vendor charges for each employee enrolled in the service.
• Monthly Fee: A vendor may charge a fixed price for unlimited employees.
• Set Fee: This fee is based on automated software the employer uses for data entry and monitoring.
• Custom Quote: Some payroll services provide custom quotes for each client who needs personalized software to fit their needs.
• License Fee: A company pays this fee for business software or add-ons to existing software. The license fee can be a one-time fee or a term contract.

Other Payroll Costs 

You may have to create an account for several other payroll liabilities, depending on the employee benefits you offer and your employees’ current financial liabilities, which include the following:

• Health insurance
• Retirement fund contributions
• Wage garnishments
• Company stock purchases
• Savings account deposits
• Loan payments
• Union dues
• Contributions to charity
• Alimony

All contributions and withholdings are payroll liabilities until you transfer money to the correct agencies.

Types of  Payroll Expenses

Payroll expense may be the largest expense that a company incurs, especially when it is in a services industry where revenues are directly related to your working hours. These are the expenses you pay as a business owner for your employees.

There are two kinds to consider;

• Firstly, you have the expenses that are deducted from your employee wages including contributions to benefits such as insurance, retirement funds, and any other deductions. 
• Second, you have payroll taxes and obligations that are specific to you as an employer, including social security, Medicare, and unemployment taxes.

Payroll expenses consist of several components, such as gross salaries and wages, tax withholdings, benefits withholdings, costs related to payroll services, and much more. 

Employee Salaries and Wages

Employers must pay employees and contractors for the services they perform. Salaries and wages are usually the largest payroll expenses you pay for employers. This is the primary component of payroll expense which represents an employee’s basic salary without including additional incentives and before making any deductions. This amount is taxable.

Withholding Taxes

Withholding taxes refer to the amount of money you withhold from your employee’s paycheck to pay for their taxes. When your employee submits a W-4 form, you will be able to calculate the exact amount of taxes you need to withhold.

The taxes to be withheld may include the following:

• State Income Tax (SIT)
• FICA (Medicare and Social Security)
• Federal Income Taxes (FIT)

Unemployment Tax (FUTA and SUTA) Withholdings

Unemployment tax withholdings can provide workers with crucial income as they search for new job opportunities. The Federal Unemployment Tax Act and State Unemployment Tax Act offer temporary financial assistance for those who lose employment.

The current employer’s FUTA tax rate is 6% on the first $7,000 in gross income a worker earns. However, if the state unemployment tax applies to wages, the employer can use a 5.4% FUTA credit, which reduces the FUTA tax to 0.6%. Total federal and state unemployment taxes vary and depend on the unemployment program in each state.

Benefit Withholdings

As an employer, you likely understand the importance of offering employee benefits. It’s a strategic approach that can lead to a happier workforce, higher employee retention, and overall success for your business. However, administering these benefits can be complicated, especially regarding withholdings.

Benefits withholding refers to deducting an employee’s share of the benefit plan from their gross compensation. Depending on your company, you may cover a portion or all of the benefits costs from a worker’s pay.

Some examples of employee benefits include:

• Health care coverage (health insurance, dental, vision, etc.)
• Paid leave (PTO and sick days)
• 401(k) or other retirement plans
• Life insurance

For example, you may withhold amounts for the employee’s share of insurance premiums or their retirement contributions. Your share of the costs is a payroll expense. Generally, the only payroll cost for an independent contractor or freelancer is the dollar amount you pay for services.

How Do Payroll Liabilities Work?

You can understand the work here: 

• Employee Deductions: Federal/state taxes and other deductions that are taken directly from the employees, such as retirement deductions.
• Employer Contributions: The remuneration for employer’s contributions such as social security, Medicare, unemployment taxes, and workman’s compensation, among others.
• Accrual in QuickBooks: QuickBooks recognizes these obligations when processing payroll.
• Payment of Liabilities: The business disburses the liabilities on the due date (for example, taxes and employee benefits).
• Reports: QuickBooks is used to prepare reports such as the Payroll Liabilities Report to monitor what is due.

How Do Payroll Expenses Work?

You can understand the work here:

• Employee Compensation: Salaries or wages that are provided to its employees.
• Employer Payroll Taxes: Employers contribute taxes such as Social Security tax or Medicare tax.
• Benefits and Other Compensation: Expenses that fall under mandatory and discretionary categories, such as medical expenses and insurance, pension contributions, etc
• Accrual in QuickBooks: These are expense accounts that are charged when employees are paid since QuickBooks identifies them when preparing payroll.
• Reports: QuickBooks has features like the Payroll Summary that give an overall outlook of the entire total payroll costs.

Difference Between Independent Contractors vs Employees

The major difference between hiring contractors and employees is to do with tax withholdings. Contractors are responsible for their own tax withholdings. They will submit their own FICA and benefits plans. When we pay contractors their gross compensation, they handle the complexities of tax withholdings, making it a seamless transaction.

Employers must also include payments to freelancers and independent contractors in their payroll expenses. However, it’s important to note that you don’t have to withhold any of an independent contractor’s gross income.

A worker’s classification determines how your business handles tax withholdings for them. If the worker is an employee, you’re responsible for the payroll expenses. Independent contractors, on the other hand, are responsible for all tax withholdings and don’t receive benefits from the business, so your only payroll expense is the gross amount you pay for services.

Bottom Line!

Payroll liabilities are the amounts a company owes but has not yet paid to the employees. These include things like employee tax withholdings, social security, Medicare, and other deductions such as health insurance premiums or retirement contributions. They are recorded as liabilities on the balance sheet until they are paid. Employers need to know how much they need to pay for these when hiring employees in order to maintain profitability over time.

Payroll Expenses are costs the company incurs for employee compensation. These include wages, salaries, benefits, and employer-paid taxes. Payroll expenses are recorded on the income statement and directly affect the company’s profitability. So, it’s important to closely review your payroll expenses and ensure you’re accurately tracking deductions and taxes.

FAQs

Why do I use the Accrual Method for payroll, and what happens if I use the Cash Method instead?

The Accrual Method of accounting is the required standard for accurate payroll recording, especially for companies subject to GAAP (Generally Accepted Accounting Principles) or those over certain size thresholds.

The fundamental reason is the matching principle: payroll costs (wages, taxes, and benefits) must be recorded as an Expense in the same accounting period when the employee provided the service (the work was performed), regardless of when the physical paycheck is issued.

If you use the Cash Method, you create a financial misrepresentation:

• Financial Distortion: Your Income Statement will incorrectly show lower expenses and higher profits in the period the liability was incurred (e.g., December) and artificially higher expenses in the period the cash was paid (e.g., January).
• Compliance Risk: This method does not accurately reflect your company’s true obligations, which can lead to errors in forecasting and non-compliance with standards required for audited financial statements.

If I withhold an employee’s portion for health insurance, why is that considered a Payroll Liability and not an Expense?

An employee’s withholding for benefits, such as a health insurance premium, is classified as a Payroll Liability because the funds are not a cost to the employer; they are simply pass-through funds belonging to the employee.

• The employer’s role: The employer acts as a fiduciary (a person or entity entrusted with the money).
• The accounting: The money withheld from the employee’s paycheck is immediately recorded as a Liability on the Balance Sheet because it is a debt owed by the company to the insurance provider. The liability is only cleared when the employer remits the payment to the insurance company.
• The employer’s Expense: Only the employer’s matching contribution toward that premium is recorded as a Payroll Expense on the Income Statement.

How does the payment to an Independent Contractor (1099 worker) affect my Payroll Liabilities and Expenses in QuickBooks?

The classification of a worker as an Independent Contractor (IC) fundamentally changes the employer’s tax and withholding responsibilities, resulting in zero Payroll Liabilities.

• Payroll Liabilities: None. The business is generally not required to withhold federal income tax, Social Security, or Medicare taxes from the contractor’s gross pay. The contractor is responsible for paying their own self-employment taxes.
• Payroll Expenses: The entire gross amount paid to the contractor is recorded as a single Payroll Expense (typically classified as Contract Labor or Professional Services) on the Income Statement. The employer does not incur matching FICA or FUTA/SUTA expenses.
• IRS Focus: The IRS relies on the Behavioral Control, Financial Control, and Type of Relationship to determine proper classification; misclassification can result in severe penalties.

What is the difference between FICA and FUTA/SUTA, and which one impacts both the employer and the employee?

These are separate federal tax programs:

1. FICA (Federal Insurance Contributions Act)
   • Purpose: Funds Social Security and Medicare.
   • Impact: Impacts both the Employer and the Employee. Both parties pay an equal share.
     • Employee’s share is withheld from wages (creating a payroll liability).
     • Employer’s matching share is an additional Payroll Expense (creating a payroll liability until remitted).
   • 2025 Rates (for example): Social Security is 6.2% each, Medicare is 1.45% each (Note: Medicare has no wage limit, and an Additional Medicare Tax of 0.9% is withheld from employees earning over $200,000, with no employer match).
2. FUTA (Federal Unemployment Tax Act) & SUTA (State Unemployment Tax Act)
   • Purpose: Provides temporary financial benefits to workers who lose their jobs.
   • Impact: Primarily impacts the Employer only. The employer pays these taxes as an additional Payroll Expense.
   • Employer Liability: The full amount is an employer-paid Payroll Liability until remitted.

My Payroll Liabilities Report in QuickBooks doesn’t match my Balance Sheet’s liability amount. Why?

This common reconciliation issue, where the specific payroll report disagrees with the general ledger (Balance Sheet), most often stems from an action that affects the liability account but bypasses the payroll function.

The two most frequent causes are:

• Manual/Incorrect Journal Entries: A user may have manually entered a transaction (a journal entry) directly into the liability account to make a payment or adjustment, but did not use the official “Pay Liabilities” function in the payroll module.
• Date Discrepancy or Missed Payment: The Balance Sheet is run for a specific date (e.g., 12/31), but a liability payment meant to clear the account was recorded with an incorrect date (e.g., 1/1) or the liability was created in one quarter but not paid in the subsequent quarter.

When an employee takes Paid Time Off (PTO), how is that time classified as a Liability and an Expense?

The classification of PTO depends on the employee’s rights and the company’s policy under GAAP guidance (specifically FASB ASC 710).

• Liability (Accrued PTO): The company must record the value of accumulated, unused PTO as a Payroll Liability on the Balance Sheet if all these conditions are met:
  1. The obligation is for services already rendered.
  2. The rights vest or accumulate (meaning they are carried over and must be paid out upon termination).
  3. Payment is probable and the amount can be reasonably estimated.
• Expense: When the employee actually takes and is paid for the PTO, the cost is recorded as a Payroll Expense on the Income Statement, as it is an actual wage payment for the period.

Besides gross pay and taxes, what are three other less obvious items that create Payroll Liabilities?

Payroll Liabilities are created by any item that is withheld from an employee’s pay but must be sent to a third party. Non-tax deductions that become liabilities include:

• Wage Garnishments: Court-ordered amounts (e.g., for child support, alimony, or tax levies) that the employer is legally obligated to withhold and remit to the court or agency.
• Union Dues: Fees deducted from an employee’s paycheck as a condition of employment or union membership, which must then be transferred to the union organization.
• Employee Loan Repayments: If an employer provides a loan to an employee and payment is collected via payroll deduction, the amount withheld is a liability until it is credited back to the company’s Loan Receivable (Asset) account.

Disclaimer: The information outlined above for “What is The Difference Between Payroll Liabilities And Payroll Expenses In QuickBooks?” is applicable to all supported versions, including QuickBooks Desktop Pro, Premier, Accountant, and Enterprise. It is designed to work with operating systems such as Windows 7, 10, and 11, as well as macOS.